Showing: 10 from total: 31 publications
1.
Automated Optical Tweezers for Enhanced Bioparticle Analysis via Combined Scattering and Raman Spectroscopy
Teixeira, J
; Ribeiro, J
; Silva, N
; Jorge, P
in 2024 IEEE SENSORS APPLICATIONS SYMPOSIUM, SAS 2024, 2024, ISSN: 2994-9300, Volume: 36,
Proceedings Paper, Indexed in: crossref, scopus, wos
Abstract
This paper describes the development of an optical tweezers system that operates in fully automatic mode. It features image recognition for particle tracking, allowing for the optical trapping and analysis of identified targets. The system can perform analysis of forward scattered light and Raman spectroscopy of the trapped particles, facilitating the automated analysis of a large number of samples without manual intervention. By leveraging combined analytical methods and AI for robust classification, this system contributes to the advancement of automated diagnostic tools. Preliminary results demonstrate the system's effectiveness using different kinds of standard and biofunctionalized PMMA microparticles.
2.
Assessment of mobile mercury concentration in soils of an abandoned coalfield waste pile in Douro region: the Fojo waste pile (Portugal) study case
Monteiro, M
; Santos, P
; Marques, JE
; Flores, D
; Pereira, CM
; Ribeiro, JA
; Azenha, M
in JOURNAL OF SOILS AND SEDIMENTS, 2024, ISSN: 1439-0108, Volume: 24,
Article, Indexed in: crossref, scopus, unpaywall, wos
Abstract
Purpose Pejao Mining Complex locates in Castelo de Paiva municipality and, until its closure in 1994, was one of the most important coal mines in the Douro Coalfield. This work aims to study the presence, quantify, and evaluate the dissemination of mercury (Hg), a potentially toxic element (PTE) of major public health concern by the World Health Organization (WHO), from a waste pile affected by coal fires.Materials and methods Samples from areas affected and unaffected by the combustion and from surrounding soil were collected from Fojo waste pile region. First, the Hg pseudo-total concentration was estimated for all collected samples by soil microwave-assisted digestion with aqua regia (USEPA 3051A). Then, a sequential extraction procedure (SEP), the USEPA 3200, was applied for Hg fractionation and speciation aiming to evaluate Hg mobility and bioavailability to surrounding ecosystems.Results and discussion The results obtained showed a Hg enrichment in soil samples when compared to Portuguese and international reference values for soils. Relatively to the Hg availability and mobility, although it predominates in the semi-mobile fraction, the waste pile materials exposed to combustion showed a concerning increase of Hg levels in the mobile fraction that contains the more labile Hg species, being a major source of environmental contamination by Hg.Conclusions This study allowed to conclude that combustion of mining residues increased Hg mobility, toxicity, and bioavailability, increasing the contamination potential of the coal waste pile. The methodology applied in this work can be replicated in other abandoned mines to monitor, control, and/or mitigate the Hg environmental impact in the surrounding soils and waters.
3.
Development of a new opto-electrochemical cell for sensing applications
Mendes, JP
; Coelho, LCC
; Ribeiro, JA
in 2024 IEEE SENSORS APPLICATIONS SYMPOSIUM, SAS 2024, 2024, ISSN: 2994-9300,
Proceedings Paper, Indexed in: crossref, scopus, wos
Abstract
New systems with innovative design to perform measurements combining electrochemistry and surface plasmon resonance (ESPR) are currently a need to overcome the limitations of existent market solutions and expand the research possibilities of this technology. The main goal of this work was to develop a new cell to increase ESPR practical applications in several fields. To do so, a homemade SPR cell, fabricated by 3D-printing technology, was adapted for this purpose by incorporating the conventional 3-electrodes to perform the electrochemical experiments. The developed cell was fully compatible with commercial SPR substrates. After optimization of the homemade ESPR setup to perform the combined electrochemical and SPR measurements, two main applications were explored in this work. The first was the use of ESPR technology as straightforward tool to simultaneously investigate the electrical and optical properties of conducing/nonconducting polymers electrosynthetized on the SPR platforms. The conducting polymer poly(thionine) was used in this work for proof-of- concept. The second application envisaged the use of ESPR approach for simple electrodeposition of materials with enhanced plasmonic properties for sensitivity enhancement of SPR biosensors. For validation of the concept, graphene oxide (GO) was electrochemically reduced on gold substrates aiming to evaluate the plasmonic properties of graphene-modified sensing surfaces.
4.
Applications of Electrochemistry at the ITIES in Drug Discovery and Development - A Review
Ribeiro, JA
; Pereira, CM
in CHEMELECTROCHEM, 2024, ISSN: 2196-0216, Volume: 11,
Review, Indexed in: crossref, scopus, wos
Abstract
The field of electrochemistry at the interface between two immiscible electrolyte solutions (ITIES) has been continuously expanding over the years due to their vast number of applications, including to investigate the partitioning of ionizable drugs at liquid-liquid systems. The aim of this Review is to highlight the great potential of ITIES as simple model of biological membranes to gather information on drug partition, lipophilicity, and pharmacokinetics that can be very useful for researchers in the field of drug discovery for development of new drugs with enhanced permeability. Relevant contributions and perspectives to improve the applicability of ITIES in partition studies were highlighted and discussed. The second part of this Review pretends to highlight the application of electrochemistry at the ITIES as experimental technique to investigate interactions between small ligands, including drugs, and DNA, a topic of high research interest in pharmaceutical and biological sciences, which remains with lots of opportunities to explore. Voltammetry at Liquid-Liquid Interfaces can be a versatile tool in the field of Drug Discovery as simple model for mimicking drug permeation through biological membranes helping to understand the partition of ionizable drugs between the aqueous and organic phases while providing fundamental information on its lipophilicity that can contribute to the design of new drugs with improved biological activity. image
5.
Applications of electrochemical impedance spectroscopy in disease diagnosis-A review
Ribeiro, JA
; Jorge, PAS
in SENSORS AND ACTUATORS REPORTS, 2024, ISSN: 2666-0539, Volume: 8,
Review, Indexed in: crossref, scopus, wos
Abstract
Electrochemical impedance spectroscopy (EIS) is a reliable technique for gathering information about electrochemical process occurring at the electrode surface and investigating properties of materials. Furthermore, EIS technique can be a very versatile and valuable tool in analytical assays for detection and quantification of several chemically and biologically relevant (bio)molecules. The first part of this Review (Introduction) provides brief insights into (i) theoretical aspects of EIS, (ii) the instrumentation required to perform the EIS studies and (iii) the most relevant representations of impedance experimental data (such as Nyquist and Bode plots). In the end of this section, (iv) theoretical aspects regarding the fitting of the Randles circuit to experimental data are addressed, not only to obtain information about electrochemical processes but also to illustrate its utility for analytical purposes. The second part of the Review (Impedimetric Detection of Disease Biomarkers) focuses on the applications of EIS in the biomedical field, particularly as analytical technique in electrochemical sensors and biosensors for screening disease biomarkers. In the last section (Conclusions and Perspectives), we discuss main achievements of EIS technique in analytical assays and provide some perspectives, challenges and future applications in the biomedical field.
6.
Probing molecular affinity with optical tweezers
Teixeira, J
; Ribeiro, A
; Jorge, AS
; Silva, A
in Proceedings of SPIE - The International Society for Optical Engineering, 2024, ISSN: 0277-786X, Volume: 12991,
Proceedings Paper, Indexed in: crossref, scopus
Abstract
Recent advances in optical trapping have opened new opportunities for manipulating micro and nanoparticles, establishing optical tweezers (OT) as a powerful tool for single-cell analysis. Furthermore, intelligent systems have been developed to characterize these particles, as information about their size and composition can be extracted from the scattered radiation signal. In this manuscript, we aim to explore the potential of optical tweezers for the characterization of sub-micron size variations in microparticles. We devised a case study, aiming to assess the limits of the size discrimination ability of an optical tweezer system, using transparent 4.8 µm PMMA particles, functionalized with streptavidin. We focused on the heavily studied streptavidin-biotin system, with streptavidin-functionalized PMMA particles targeting biotinylated bovine serum albumin. This binding process results in an added molecular layer to the particle’s surface, increasing its radius by approximately 7 nm. An automatic OT system was used to trap the particles and acquire their forward-scattered signals. Then, the signals’ frequency components were analyzed using the power spectral density method followed by a dimensionality reduction via the Uniform Manifold Approximation and Projection algorithm. Finally, a Random Forest Classifier achieved a mean accuracy of 94% for the distinction of particles with or without the added molecular layer. Our findings demonstrate the ability of our technique to discriminate between particles that are or are not bound to the biotin protein, by detecting nanoscale changes in the size of the microparticles. This indicates the possibility of coupling shape-changing bioaffinity tools (such as APTMERS, Molecular Imprinted Polymers, or antibodies) with optical trapping systems to enable optical tweezers with analytical capability. © 2024 SPIE.
7.
Electrochemical detection of atrial natriuretic peptide-coated nanocarriers based on a molecularly imprinted polymer receptor thin film
Silva, AT
; Bártolo, R
; Santos, HA
; Pereira, CM
; Ribeiro, JA
in ELECTROCHIMICA ACTA, 2024, ISSN: 0013-4686, Volume: 500,
Article, Indexed in: crossref, scopus, wos
Abstract
Molecularly imprinted polymers (MIPs) are biomimetic materials of great interest in the scientific and industrial fields for the development of innovative sensing strategies. Herein, we proposed a new sensing application by developing an electrochemical sensor using molecular imprinting (MI) technology for recognition of atrial natriuretic peptide (ANP) both as a free molecule in solution and attached to nanoparticle-based drug delivery systems (DDSs), aiming to provide fast and reliable information on the cell uptake of nanoparticles (NPs). As proof of concept, poly(lactic-co-glycolic acid) (PLGA) NPs were synthesized and used as nanocarriers for ischemic heart disease therapy were synthesized and then functionalized with ANP (named here as PLGANPs@ANP). The MIP receptor film was prepared by electrochemical polymerization of dopamine over the working area of a gold screen-printed electrode (AuSPE), using cyclic voltammetry (CV) technique. The construction of the ANP sensor was carefully optimized to enhance its performance, including the film thickness and the procedures for effective template extraction from the MIP matrix. The MIP biosensor presented a linear response against polymeric NPs (PLGA-NPs@ANP) concentration logarithm ranging from 4.0 mu g mL(-1) to 100 mu g mL(-1), with a sensitivity of - 0.0129 mA mL mu g(-1) decade(-1) and an LOD < 4.0 g mL(-1). Furthermore, the developed MIP receptor film was able to discriminate ANP-functionalized nanocarriers from non-functionalized NPs.
8.
Automation of optical tweezers: an enabler for single cell analysis and diagnostic
Jorge, P
; Teixeira, J
; Rocha, V
; Ribeiro, J
; Silva, N
in BIOPHOTONICS IN POINT-OF-CARE III, 2024, ISSN: 0277-786X, Volume: 13008,
Proceedings Paper, Indexed in: crossref, scopus, wos
Abstract
Sensing at the single cell level can provide insights into its dynamics and heterogeneity, yielding information otherwise unattainable with traditional biological methods where average population behavior is observed. In this context, optical tweezers provide the ability to select, separate, manipulate and identify single cells or other types of microparticles, potentially enabling single cell diagnostics. Forward or backscatter analysis of the light interacting with the trapped cells can provide valuable insights on the cell optical, geometrical and mechanical properties. In particular, the combination of tweezers systems with advanced machine learning algorithms can enable single cell identification capabilities. However, typical processing pipelines require a training stage which often struggles when trying to generalize to new sets of data. In this context, fully automated tweezers system can provide mechanisms to obtain much larger datasets with minimum effort form the users, while eliminating procedural variability. In this work, a pipeline for full automation of optical tweezers systems is discussed. A performance comparison between manually operated and fully automated tweezers systems is presented, clearly showing advantages of the latter. A case study demonstrating the ability of the system to discriminate molecular binding events on microparticles is presented.
9.
Discarded substrates from soilless hydroponic horticulture as potential amendments for metal-contaminated soils
Gonçalves, J
; Araújo, A
; Pedron, T
; Santos, R
; Bouguerra, S
; Ribeiro, A
; Pereira, R
; Pereira, M
; Azenha, M
in Chemosphere, 2024, ISSN: 0045-6535, Volume: 364,
Article, Indexed in: crossref, scopus
Abstract
Soil contamination with metals is a major threat for the environment and public health since most metals are toxic to humans and to non-human biota, even at low concentrations. Thus, new sustainable remediation approaches are currently needed to immobilize metals in soils to decrease their mobility and bioavailability. In this work, we explore the application of discarded substrates from hydroponic cultivation, namely coconut shell and a mixture of coconut shell and pine bark, for immobilization of metals (Cd, Cr, Ni, Cu, Pb, Hg, Sb and As) in a naturally contaminated soil from a mining region in Portugal. The immobilization capacity of substrates (added to the soil at 5% mass ratio) was assessed both individually and also combined with other traditional agriculture soil additives (limestone and gypsum, at 2% mass ratio) and nanoparticles of zero-valent iron (nZVI) at 1–3% mass ratio. The overall results obtained after a 30-d incubation showed that the discarded substrates are a viable, economic, and environmental-friendly solution for metal remediation in soils, with the capacity of immobilization ranging from 20 to 91% for the metals and metalloids studied. Furthermore, they showed the capacity to reduce the soil toxicity (EC50 ∼ 6000 mg/L) to non-toxic levels (EC50 > 10000 mg/L) to the bacteria Aliivrio fischeri. © 2024 The Authors
10.
Electroanalytical applications of ITIES - A review
Ribeiro, JA
; Silva, AF
; Girault, HH
; Pereira, CM
in TALANTA, 2024, ISSN: 0039-9140, Volume: 280,
Review, Indexed in: crossref, scopus, wos
Abstract
Over the last decades, the interface between two immiscible electrolyte solutions (ITIES) attracted considerable attention of the scientific community due to their vast applications, such as extraction, catalysis, partition studies and sensing. The aim of this Review is to highlight the potential of electrochemistry at the ITIES for analytical purposes, focusing on ITIES-based sensors for detection and quantification of chemically and biologically relevant (bio)molecules. We start by addressing the evolution of ITIES in terms of number of publications over the years along with an overview of their main applications (Chapter 1). Then, we provide a general historical perspective about pioneer voltammetric studies at water/oil systems (Chapter 2). After that, we discuss the most impacting improvements on ITIES sensing systems from both perspectives, set-up design (interface stabilization and miniaturization, selection of the organic solvent, etc.) and optimization of experimental conditions to improve selectivity and sensitivity (Chapter 3). In Chapter 4, we discuss the analytical applications of ITIES for electrochemical sensing of several types of analytes, including drugs, pesticides, proteins, among others. Finally, we highlight the present achievements of ITIES as analytical tool and provide future challenges and perspectives for this technology (Chapter 5).