Showing: 10 from total: 2465 publications
921.
Excited-State Proton Transfer and Formation of the Excited Tautomer of 3-Hydroxypyridine-Dipicolinium Cyanine Dye
Green, O
; Simkovitch, R
; da Silva, LP
; Esteves da Silva, JCGE
; Shabat, D
; Huppert, D
in JOURNAL OF PHYSICAL CHEMISTRY A, 2016, ISSN: 1089-5639, Volume: 120,
Article, Indexed in: crossref, scopus, wos
Abstract
Steady-state and time-resolved fluorescence techniques and theoretical calculations were employed to study the photoprotolytic properties of a newly synthesized photoacid 3-hydroxypyridine-dipicolinium cyanine (HPPC) dye. This dye is similar to quinone cyanine 9, which we have previously studied and is the strongest photoacid currently synthesized. In this compound, we found that several proton transfer phenomena occur after excitation. We found that the excited-state proton transfer (ESPT) rate in water is ultrafast with k(pT) approximate to 1.5 x 10(12) s(-1). In methanol and ethanol the rate is slower by about 5 and 6 times, respectively. The fluorescence spectrum of HPPC in water consists of three bands with maxima at 520, 600, and 665 nm, whereas in monols and other protic solvents the fluorescence spectrum consists only of two emission bands at 530 and similar to 700 nm. We assign the emission bands of HPPC at 520 nm to the protonated form and the 700 nm band in monols and 665 nm in water to the deprotonated form. The 600 nm band that is the most intense band in the fluorescence spectrum of HPPC in water we assign to the tautomeric form in which the proton is attached to the pyridine's nitrogen atom. On the basis of density functional calculations, we suggest that in water the proton transfer process to the pyridine's nitrogen atom occurs in a stepwise manner via a two water molecule bridge.
922.
Topological sub-structural molecular design (TOPS-MODE): a useful tool to explore key fragments of human adenosine receptor ligands
Saíz Urra, L
; Teijeira, M
; Rivero Buceta, V
; Helguera, AM
; Celeiro, M
; Terán, MC
; Besada, P
; Borges, F
in MOLECULAR DIVERSITY, 2016, ISSN: 1381-1991, Volume: 20,
Article, Indexed in: crossref, scopus, wos
Abstract
Adenosine regulates tissue function by activating four G-protein-coupled adenosine receptors (ARs). Selective agonists and antagonists for ARs have been investigated for the treatment of a variety of immune disorders, cancer, brain, and heart ischemic conditions. We herein present a QSAR study based on a Topological sub-structural molecular design (TOPS-MODE) approach, intended to predict the ARs of a diverse dataset of 124 (94 training set/ 30 prediction set) adenosine derivatives. The final model showed good fit and predictive capability, displaying 85.1 % of the experimental variance. The TOPS-MODE approach afforded a better understanding and interpretation of the developed model based on the useful information extracted from the analysis of the contribution of different molecular fragments to the affinity.
923.
Testing the variability of PSA expression by different human prostate cancer cell lines by means of a new potentiometric device employing molecularly antibody assembled on graphene surface
Rebelo, TSCR
; Noronha, JP
; Galesio, M
; Santos, H
; Diniz, M
; Sales, MGF
; Fernandes, MH
; Costa Rodrigues, J
in MATERIALS SCIENCE & ENGINEERING C-MATERIALS FOR BIOLOGICAL APPLICATIONS, 2016, ISSN: 0928-4931, Volume: 59,
Article, Indexed in: crossref, scopus, wos
Abstract
Prostate Specific Antigen (PSA) is widely used as a biomarker for prostate cancer. Recently, an electrochemical biosensor for PSA detection by means of molecularly imprinted polymers (MIPs) was developed. This work evaluated the performance and the effectiveness of that PSA biosensor in screening the biomarker PSA in biological media with complex composition, collected from different human prostate cell line cultures. For that, the prostate cancer LNCaP and PC3 cells, and the non-cancerous prostate cell line PNT2 were cultured for 2, 7 and 14 days in either alpha-MEM or RPMI in the presence of 10% or 30% fetal bovine serum. Human gingival fibroblasts were used as a non-cancerous non-prostatic control. The different culture conditions modulated cellular proliferation and the expression of several prostate markers, including PSA. The electrochemical biosensor was able to specifically detect PSA in the culture media and values obtained were similar to those achieved by a commercial Enzyme-Linked Immunosorbent Assay (ELISA) kit, the most commonly used method for PSA quantification in prostate cancer diagnosis. Thus, the tested biosensor may represent a useful alternative as a diagnostic tool for PSA determination in biological samples.
924.
Development of Blood-Brain Barrier Permeable Nitrocatechol-Based Catechol O-Methyltransferase Inhibitors with Reduced Potential for Hepatotoxicity
Silva, T
; Mohamed, T
; Shakeri, A
; Rao, PPN
; Martinez Gonzalez, L
; Perez, DI
; Martinez, A
; Valente, MJ
; Garrido, J
; Uriarte, E
; Serrao, P
; Soares da Silva, P
; Remiao, F
; Borges, F
in JOURNAL OF MEDICINAL CHEMISTRY, 2016, ISSN: 0022-2623, Volume: 59,
Article, Indexed in: crossref, scopus, wos
Abstract
Recent efforts have been focused on the development of centrally active COMT inhibitors, which can be valuable assets for neurological disorders such as Parkinson's disease, due to the severe hepatotoxicity risk associated with tolcapone. New nitrocatechol COMT inhibitors based on naturally occurring caffeic acid and caffeic acid phenethyl ester were developed. All nitrocatechol derivatives displayed potent inhibition of peripheral and cerebral COMT within the nanomolar range. Druglike derivatives 13, 15, and 16 were predicted to cross the blood brain barrier in vitro and were significantly less toxic than tolcapone and entacapone when incubated at 50 mu M with rat primary hepatocytes. Moreover, their unique acidity and electrochemical properties decreased the chances of formation of reactive quinone-imines and, as such, the potential for hepatotoxicity. The binding mode of 16 confirmed that the major interactions with COMT were established via the nitrocatechol ring, allowing derivatization of the side chain for future lead optimization efforts.
925.
Exploring coumarin potentialities: development of new enzymatic inhibitors based on the 6-methyl-3-carboxamidocoumarin scaffold
Fonseca, A
; Matos, MJ
; Reis, J
; Duarte, Y
; Gutierrez, M
; Santana, L
; Uriarte, E
; Borges, F
in RSC ADVANCES, 2016, ISSN: 2046-2069, Volume: 6,
Article, Indexed in: crossref, scopus, wos
Abstract
Novel 6-methyl-3-carboxamidocoumarins (compounds 4-15) were synthesized by an effective three step synthetic strategy and screened towards MAO, AChE and BuChE enzymes. In general, the compounds act as selective MAO-B inhibitors. Compound 11 is highlighted as a potent (IC50 hMAO-B = 4.66 nM), reversible and non-competitive MAO-B inhibitor.
926.
Crystal structures of five 6-mercaptopurine derivatives
Gomes, LR
; Low, JN
; Silva, DME
; Cagide, F
; Borges, F
in ACTA CRYSTALLOGRAPHICA SECTION E-CRYSTALLOGRAPHIC COMMUNICATIONS, 2016, ISSN: 2056-9890, Volume: 72,
Article, Indexed in: crossref, scopus, wos
Abstract
The crystal structures of five 6-mercaptopurine derivatives, viz. 2-[(9-acetyl-9H-purin-6-yl) sulfanyl]-1-(3-methoxyphenyl) ethan-1-one (1), C16H14N4O3S, 2-[(9-acetyl-9H-purin-6-yl)sulfanyl]-1-(4-methoxyphenyl) ethan-1-one (2), C16H14N4O3S, 2-[(9-acetyl-9H-purin-6-yl)sulfanyl]-1-(4-chlorophenyl)ethan-1-one (3), C15H11ClN4O2S, 2-[(9-acetyl-9H-purin-6-yl)sulfanyl]-1-(4-bromophenyl)ethan-1-one (4), C15H11BrN4O2S, and 1-(3-methoxyphenyl)-2-[(9H-purin-6-yl)sulfanyl] ethan-1-one (5), C14H12N4O2S. Compounds (2), (3) and (4) are isomorphous and accordingly their molecular and supramolecular structures are similar. An analysis of the dihedral angles between the purine and exocyclic phenyl rings show that the molecules of (1) and (5) are essentially planar but that in the case of the three isomorphous compounds (2), (3) and (4), these rings are twisted by a dihedral angle of approximately 38 degrees. With the exception of (1) all molecules are linked by weak C-H center dot center dot center dot O hydrogen bonds in their crystals. There is pi-pi stacking in all compounds. A Cambridge Structural Database search revealed the existence of 11 deposited compounds containing the 1-phenyl-2-sulfanylethanone scaffold; of these, only eight have a cyclic ring as substituent, the majority of these being heterocycles.
927.
Crystal structures of three 3,4,5-trimethoxybenzamide-based derivatives
Gomes, LR
; Low, JN
; Oliveira, C
; Cagide, F
; Borges, F
in ACTA CRYSTALLOGRAPHICA SECTION E-CRYSTALLOGRAPHIC COMMUNICATIONS, 2016, ISSN: 2056-9890, Volume: 72,
Article, Indexed in: crossref, scopus, wos
Abstract
The crystal structures of three benzamide derivatives, viz. N-(6-hydroxyhexyl)-3,4,5-trimethoxybenzamide, C16H25NO5, (1), N-(6-anilinohexyl)-3,4,5-trimethoxybenzamide, C22H30N2O4, (2), and N-(6,6-diethoxyhexyl)-3,4,5-trimethoxybenzamide, C20H33NO6, (3), are described. These compounds differ only in the substituent at the end of the hexyl chain and the nature of these substituents determines the differences in hydrogen bonding between the molecules. In each molecule, the m-methoxy substituents are virtually coplanar with the benzyl ring, while the p-methoxy substituent is almost perpendicular. The carbonyl O atom of the amide rotamer is trans related with the amidic H atom. In each structure, the benzamide N-H donor group and O acceptor atoms link the molecules into C(4) chains. In 1, a terminal -OH group links the molecules into a C(3) chain and the combined effect of the C(4) and C(3) chains is a ribbon made up of screw related R-2(2) (17) rings in which the center dot center dot center dot O-H center dot center dot center dot chain lies in the centre of the ribbon and the trimethoxybenzyl groups forms the edges. In 2, the combination of the benzamide C(4) chain and the hydrogen bond formed by the terminal N-H group to an O atom of the 4-methoxy group link the molecules into a chain of R-2(2) (17) rings. In 3, the molecules are linked only by C(4) chains.
928.
Crystal structures of three 6-substituted coumarin-3-carboxamide derivatives
Gomes, LR
; Low, JN
; Fonseca, A
; Matos, MJ
; Borges, F
in ACTA CRYSTALLOGRAPHICA SECTION E-CRYSTALLOGRAPHIC COMMUNICATIONS, 2016, ISSN: 2056-9890, Volume: 72,
Article, Indexed in: crossref, scopus, wos
Abstract
Three coumarin derivatives, viz. 6-methyl-N-(3-methylphenyl)-2-oxo-2H-chromene-3-carboxamide, C18H15NO3 (1), N-(3-methoxyphenyl)-6-methyl-2-oxo-2H-chromene-3-carboxamide, C18H15NO4 (2), and 6-methoxy-N-(3-methoxyphenyl)-2-oxo-2H-chromene-3-carboxamide, C18H15NO5 (3), were synthesized and structurally characterized. The molecules display intramolecular N-H center dot center dot center dot O and weak C-H center dot center dot center dot O hydrogen bonds, which probably contribute to the approximate planarity of the molecules. The supramolecular structures feature C-H center dot center dot center dot O hydrogen bonds and pi-pi interactions, as confirmed by Hirshfeld surface analyses.
929.
The shift from "e-learning" to "learning": Invisible technology and the dropping of the "e"
Paiva, J
; Morais, C
; Costa, L
; Pinheiro, A
in BRITISH JOURNAL OF EDUCATIONAL TECHNOLOGY, 2016, ISSN: 0007-1013, Volume: 47,
Review, Indexed in: crossref, dblp, scopus, wos
Abstract
Due to the generalization of electronically supported activities, we anticipate that, in the near future, the letter "e" in "e-learning," indicating the use of electronic media and information and communication technologies in education, will be dropped and that "e-learning" will be referred to as simply "learning." This paper presents an attempt at understanding the causes of the name shift and at predicting its consequences. We offer a constructive reflection on how e-learning has been looked upon and on what we foresee will happen in the future, drawing briefly on several areas of knowledge and on the experience of the authors as educators at university, teacher training and high school levels. Our effort has also resulted in greater awareness of the importance of social tools and of the relevance of the human factor in the learning process.
930.
New Perspectives on the Use of Phytochemicals as an Emergent Strategy to Control Bacterial Infections Including Biofilms
Borges, A
; Abreu, AC
; Dias, C
; Saavedra, MJ
; Borges, F
; Simoes, M
in MOLECULES, 2016, ISSN: 1420-3049, Volume: 21,
Review, Indexed in: crossref, scopus, wos
Abstract
The majority of current infectious diseases are almost untreatable by conventional antibiotic therapy given the advent of multidrug-resistant bacteria. The degree of severity and the persistence of infections are worsened when microorganisms form biofilms. Therefore, efforts are being applied to develop new drugs not as vulnerable as the current ones to bacterial resistance mechanisms, and also able to target bacteria in biofilms. Natural products, especially those obtained from plants, have proven to be outstanding compounds with unique properties, making them perfect candidates for these much-needed therapeutics. This review presents the current knowledge on the potentialities of plant products as antibiotic adjuvants to restore the therapeutic activity of drugs. Further, the difficulties associated with the use of the existing antibiotics in the treatment of biofilm-related infections are described. To counteract the biofilm resistance problems, innovative strategies are suggested based on literature data. Among the proposed strategies, the use of phytochemicals to inhibit or eradicate biofilms is highlighted. An overview on the use of phytochemicals to interfere with bacterial quorum sensing (QS) signaling pathways and underlying phenotypes is provided. The use of phytochemicals as chelating agents and efflux pump inhibitors is also reviewed.