Publications

Abstract With the aim to find out the structural features for the MAO inhibitory activity and selectivity, in the present communication we report the synthesis and pharmacological evaluation of a new series of bromo-6-methyl-3-phenylcoumarin derivatives (with bromo atom in both different benzene rings of the skeleton) with and without different number of methoxy substituent at the 3-phenyl ring. The methoxy substituents were introduced, in this new scaffold, in the meta and/or para positions of the 3-phenyl ring. The synthesized compounds 3-7 were evaluated as MAO-A and B inhibitors using R-(-)-deprenyl (selegiline) and iproniazide as reference inhibitors, showing, most of them, MAO-B inhibitory activities in the low nanomolar range. Compounds 4 (IC(50) = 11.05 nM), 5 (IC(50) = 3.23 nM) and 6 (IC(50) = 7.12 nM) show higher activity than selegiline (IC(50) = 19.60 nM) and higher MAO-B selectivity, with more than 9050-fold, 30,960-fold and 14,045-fold inhibition levels, with respect to the MAO-A isoform.

Abstract Desirability theory (DT) is a well-known multi-criteria decision-making approach. In this work, DT is employed as a prediction model (PM) interpretation tool to extract useful information on the desired trade-offs between binding and relative efficacy of N6-substituted-4'-thioadenosines A(3) adenosine receptor (A(3)AR) agonists. At the same time, it was shown the usefulness of a parallel but independent approach providing a feedback on the reliability of the combination of properties predicted as a unique desirability value. The appliance of belief theory allowed the quantification of the reliability of the predicted desirability of a compound according to two inverse and independent but complementary prediction approaches. This information is proven to be useful as a ranking criterion in a ligand-based virtual screening study. The development of a linear PM of the A(3)AR agonists overall desirability allows finding significant clues based on simple molecular descriptors. The model suggests a relevant role of the type of substituent on the N6 position of the adenine ring that in general contribute to reduce the flexibility and hydrophobicity of the lead compound. The mapping of the desirability function derived of the PM offers specific information such as the shape and optimal size of the N6 substituent. The model herein developed allows a simultaneous analysis of both binding and relative efficacy profiles of A(3)AR agonists. The information retrieved guides the theoretical design and assembling of a combinatorial library suitable for filtering new N6-substituted-4'-thioadenosines A(3)AR agonist candidates with simultaneously improved binding and relative efficacy profiles. The utility of the desirability/belief-based proposed virtual screening strategy was deduced from our training set. Based on the overall results, it is possible to assert that the combined use of desirability and belief theories in computational medicinal chemistry research can aid the discovery of A(3)AR agonist candidates with favorable balance between binding and relative efficacy profiles.

Abstract CdTe quantum dots (QDs), capped with mercaptopropionic acid (MPA), were synthesized and the variation of their fluorescence properties (steady state and lifetime)with pH was assessed in solution and when immobilized in a sol-gel host Three different sizes of CdTe QDs with excited state lifetimes ranging from 42 to 48 ns and with emission maximum at 540 nm (QD(540)). 580 nm (QD(580)) and 625 nm (QD(625)) were selected The solution pH affects the maximum emission wavelength (shifts to higher wavelengths of 23, 24 and 27 nm for QD(540), QD(550) and QP(625), respectively), the excited state lifetime and the fluorescence intensity in a reversible way. Linearization of the maximum emission wavelength variation with the pH allows the estimation of an apparent ionization constant (pK(a)) for each QD: 6.5 +/- 0.1 (QD(540)), 6.1 +/- 0.5 (QD(580)) and 5.4 +/- 0.3 (QD(625)) The variation of the QDs fluorescence properties was further explored using confocal laser scanning microscopy allowing the implementation of a new calibration method for pH imaging in solution QDs were successfully immobilized on the tip of an optical fiber by dip-coating using sal-gel procedure The immobilized QDs showed a similar pH behaviour to the one observed in solution and an apparent lifetime of 80,68 and 99 ns, respectively. The proposed QDs based methodology can be successfully used to monitor pH using wavelength encoded data in imaging and fiber optic sensing applications.

Abstract The Mitsunobu reaction is an important tool in carbocyclic nucleoside chemistry for the direct coupling of alcohols with heterocyclic bases under mild conditions. Chemical evidences for an unusual competitive O-2- vs. N-1-alkylation of 3-substituted pyrimidines is presented.

Abstract Nonnucleoside reverse transcriptase (RT) inhibitors (NNRTIs) constitute a promising therapeutic option for AIDS. However, the emergence of virus-NNRTIs resistance was found to be a major problem in the field. Toward that goal, a "knock-out" strategy stands out between the several options to circumvent the problem. However the high drug or drug-drug concentrations often used generate additional safety concerns. The need for approaches able to early integrate drug- or lead-likeness, toxicity and bioavailability criteria in the drug discovery phase is an emergent issue. Given that, we propose a combined strategy based on desirability-based multiobjective optimization (MOOP) and ranking for the prioritization of HIV-1 NNRTIs hits with appropriate trade-offs between inhibitory efficacy over the HIV-1 RI and toxic effects over MT4 blood cells. Through the MOOP process, the theoretical levels of the predictive variables required to reach a desirable RI inhibitor candidate with the best possible compromise between efficacy and safety were found. This information is used as a pattern to rank the library of compounds according to a similarity-based structural criterion, providing a ranking quality of 64%/71 %/73% in training/validation/test set. A comparative study between the sequential, parallel and multiobjective virtual screening revealed that the multiobjective approach can outperform the other approaches. These results suggest that the identification of NNRTIs hits with appropriate trade-offs between potency and safety, rather than fully optimized hits solely based on potency, can facilitate the hit to lead transition and increase the likelihood of the candidate to evolve into a successful antiretroviral drug.

Abstract In the previous work, we reported a multitarget Quantitative Structure-Activity Relationship (mt-QSAR) model to predict drug activity against different fungal species. This mt-QSAR allowed us to construct a drug-drug multispecies Complex Network (msCN) to investigate drug-drug similarity (Gonzalez-Diaz and Prado-Prado, J Comput Chem 2008, 29, 656). However, important methodological points remained unclear, such as follows: (1) the accuracy of the methods when applied to other problems; (2) the effect of the distance type used to construct the msCN; (3) how to perform the inverse procedure to study species-species similarity with multidrug resistance CNs (mdrCN); and (4) the implications and necessary steps to perform a substructural Triadic Census Analysis (TCA) of the msCN. To continue the present series with other important problem, we developed here a mt-QSAR model for more than 700 drugs tested in the literature against different parasites (predicting antiparasitic drugs). The data were processed by Linear Discriminate Analysis (LDA) and the model classifies correctly 93.62% (1160 out of 1239 cases) in training. The model validation was carried out by means of external predicting series, the model classified 573 out of 607, that is, 94.4% of cases. Next, we carried out the first comparative study of the topology of six different drug-drug msCNs based on six different distances such as Euclidean, Chebychev, Manhattan, etc. Furthermore, we compared the selected drug-drug msCN and species-species mdsCN with random networks. We also introduced here the inverse methodology to construct species-species msCN based on a mt-QSAR model. Last, we reported the first substructural analysis of drug-drug msCN using Triadic Census Analysis (TCA) algorithm. (c) 2009 Wiley Periodicals, Inc. J Comput Chem 31: 164-173, 2010

Abstract Differential capacity-potential curves, C(E), were obtained from electrochemical impedance spectra (12 kHz-2 Hz) for the interfaces between Hg and a series of alkyl imidazolium-based room temperature ionic liquids having the same anion, bis(trifluoromethanesulfonyl) imide: 1-ethyl-3-methylimidazolium bis(trifluoromethanesulfonyl) imide [EMIM][Tf(2)N], 1-butyl-3-methylimidazolium bis(trifluoromethanesulfonyl) imide [BMIM][Tf(2)N], 1-hexyl-3-methylimidazolium bis(trifluoromethanesulfonyl) imide [HMIM][Tf(2)N]. The electrocapillary curves were obtained from drop time measurements and the values of the pzc were calculated. The pzc apparently becomes more negative as the imidazolium alkyl chain length increases. A small effect of the cation is seen on the C(E) curves at negative potentials. The effect of the aromatic nature of the cation is assessed by comparing 1-butyl-1-methylimidazolium bis(trifluoromethanesulfonyl) imide, with 1-butyl-3-methylpyrrolidinium bis(trifluoromethanesulfonyl) imide [BMPyr][Tf(2)N]. The effects of temperature on the capacitance, drop time electrocapillary curve and on the pzc were also obtained. The capacity was found to increase with increasing temperature in the whole range of accessible potentials.

Abstract Mixtures of ionic surfactants of opposite charge ("catanionic" mixtures) show strongly nonideal behaviors, for example, in terms of evolution of surface tension, critical micelle concentration, or morphology with respect to composition in each surfactant. In several catanionic systems, it has been proposed that the interaction between both surfactants is so strong that lateral phase segregation occurs within bilayers, with crystallites of preferential composition demixing from the excess of the other surfactant. Here, we investigate the temperature-composition phase diagram of the myristic acid/cetyltrimethylammonium mixtures. Combining microcalorimetry, X-ray diffusion, and solid-state deuterium NMR, we demonstrate that no separation is observed in the gel (L(beta)) state. The catanionic mixtures therefore behave like two-dimensional solid solutions with a negative azeotrope: the existence of a composition at which a maximum in melting temperature is observed does not imply the existence of a preferential crystal of this composition, but results from the preferential attraction between unlike amphiphilic molecules. Additionally, this study reveals the presence of a so-called intermediate phase, that is, a phase that shows dynamic properties intermediate between that of the L(beta) and the L(alpha) phases.

Abstract Cocaine and heroin are frequently co-abused by humans, in a combination known as speedball. Recently. chemical interactions between heroin (Her) or its metabolite morphine (Mor) and cocaine (Coc) were described, resulting in the formation of strong adducts. In this work, we evaluated whether combinations of Coc and Her affect the neurotoxicity of these drugs, using rat cortical neurons incubated with Coc, Her, Her followed by Coc (Her + Coc) and Her plus Coc (Her:Coc, 1:1). Neurons exposed to Her, Her + Coc and Her:Coc exhibited a decrease in cell viability, which was more pronounced in neurons exposed to Her and Her + Coc, in comparison with neurons exposed to the mixture (Her:Coc). Cells exposed to the mixture showed increased intracellular calcium and mitochondrial dysfunction, as determined by a decrease in intracellular ATP levels and in mitochondrial membrane potential, displaying both apoptotic and necrotic characteristics. Conversely, a major increase in cytochrome c release, caspase 3-dependent apoptosis, and decreased metabolic neuronal viability were observed upon sequential exposure to Her and Coc. The data show that drug combinations potentiate cortical neurotoxicity and that the mode of co-exposure changes cellular death pathways activated by the drugs, strongly suggesting that chemical interactions occurring in Her:Coc, such as adduct formation, shift cell death mechanisms towards necrosis. Since impairment of the prefrontal cortex is involved in the loss of impulse control observed in drug addicts, the data presented here may contribute to explain the increase in treatment failure observed in speedball abusers.